Package: panelPomp
Type: Package
Title: Inference for Panel Partially Observed Markov Processes
Version: 1.8.0.0
Authors@R: c(person(given="Carles",family="Breto",role="aut",email="carles.breto@uv.es",comment=c(ORCID="0000-0003-4695-4902")),
	person(given=c("Edward","L."),family="Ionides",role="aut",comment=c(ORCID="0000-0002-4190-0174")),
	person(given=c("Aaron","A."),family="King",role="aut",comment=c(ORCID="0000-0001-6159-3207")),
	person(given="Jesse",family="Wheeler",role=c("aut","cre"),email="jesse.wheeler@usu.edu",comment=c(ORCID="0000-0003-3941-3884")),
	person(given="Aaron",family="Abkemeier",role=c("ctb"),email="aaronabk@umich.edu"))
Description: Data analysis based on panel partially-observed Markov
        process (PanelPOMP) models. To implement such models, simulate
        them and fit them to panel data, 'panelPomp' extends some of
        the facilities provided for time series data by the 'pomp'
        package. Implemented methods include filtering (panel particle
        filtering) and maximum likelihood estimation (Panel Iterated
        Filtering) as proposed in Breto, Ionides and King (2020) "Panel
        Data Analysis via Mechanistic Models"
        <doi:10.1080/01621459.2019.1604367>.
License: GPL-3
Depends: R(>= 4.1.0), pomp(>= 4.5.2)
Imports: methods
Encoding: UTF-8
Collate: 'panelPomp-package.R' 'aaa.R' 'contacts.R' 'generics.R'
        'get_col_row.R' 'panel_loglik.R' 'panel_logmeanexp.R'
        'panelPomp.R' 'panelPomp_methods.R' 'params.R' 'pfilter.R'
        'pfilter_methods.R' 'mif2.R' 'mif2_methods.R' 'panelGompertz.R'
        'panelGompertzLikelihood.R' 'panelMeasles.R'
        'panelRandomWalk.R' 'panel_designs.R' 'plot.R' 'simulate.R'
        'twentycities.R' 'uk_measles.R'
Roxygen: list(markdown = TRUE)
Suggests: knitr, rmarkdown, bookdown
VignetteBuilder: knitr
LazyData: true
Config/roxygen2/version: 8.0.0
Repository: https://jeswheel.r-universe.dev
Date/Publication: 2026-07-07 21:36:53 UTC
RemoteUrl: https://github.com/jeswheel/panelpomp
RemoteRef: HEAD
RemoteSha: 6323f0a8bd4fd948d971cb4db46196bc3adde4b0
NeedsCompilation: yes
Packaged: 2026-10-05 10:53:14 UTC; root
Author: Carles Breto [aut] (ORCID: <https://orcid.org/0000-0003-4695-4902>),
  Edward L. Ionides [aut] (ORCID:
    <https://orcid.org/0000-0002-4190-0174>),
  Aaron A. King [aut] (ORCID: <https://orcid.org/0000-0001-6159-3207>),
  Jesse Wheeler [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3941-3884>),
  Aaron Abkemeier [ctb]
Maintainer: Jesse Wheeler <jesse.wheeler@usu.edu>